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Table 2 Potential driver mutations in pGI-DLBCL

From: Whole-exome sequencing analysis identifies distinct mutational profile and novel prognostic biomarkers in primary gastrointestinal diffuse large B-cell lymphoma

#Gene Symbol

Sample

COSMIC

MDG125

SMG127

CDG291

Patient_Number_Count

TP53

P01, P02, P03, P04, P05, P17, P18, P19, P20, P21, P22, P23, P33, P34, P35, P36, P37, P41, P42, P43, P50, P51

oncogene, TSG, fusion

TSG

pancan_fre:42.00%

Yes

22

P2RY8

P09, P12, P13, P17, P18, P19, P20, P25, P27, P29, P30, P38, P52, P53

oncogene, fusion

No

No

No

14

KMT2D

P02, P08, P10, P21, P31, P32, P34, P40, P43, P46, P53

oncogene, TSG

No

No

No

11

MUC16

P01, P03, P09, P10, P13, P24, P36, P45, P50, P51

oncogene

No

No

No

10

CSMD3

P03, P06, P09, P21, P24, P28, P38, P45, P50, P53

TSG

No

No

No

10

FAT4

P01, P06, P08, P09, P19, P20, P27, P50, P52

TSG

No

No

No

9

CCND3

P06, P07, P11, P18, P22, P28, P40, P45, P48

oncogene, fusion

No

No

No

9

HIST1H1C

P06, P14, P18, P26, P27, P34, P38, P53

No

No

pancan_fre:0.60%

Yes

8

CARD11

P01, P20, P40, P43, P45, P46, P48, P52

oncogene

Oncogene

No

No

8

MYC

P04, P14, P22, P26, P33, P34, P37, P50

oncogene, fusion

No

No

No

8

LRP1B

P04, P19, P20, P26, P36, P38, P41, P52

TSG

No

No

No

8

B2M

P06, P09, P11, P20, P27, P31, P38

TSG

TSG

No

Yes

7

TET2

P07, P11, P14, P16, P27, P28, P50

TSG

TSG

pancan_fre:1.60%

Yes

7

FOXO1

P04, P11, P14, P15, P29, P34, P50

oncogene, TSG, fusion

No

No

No

7

EBF1

P01, P04, P17, P18, P26, P32, P53

TSG, fusion

No

No

No

7

BTG1

P06, P25, P27, P38, P39, P40, P42

TSG, fusion

No

No

No

7

SETD1B

P08, P18, P31, P33, P46, P47, P52

TSG

No

No

No

7

BCR

P15, P18, P26, P35, P48, P53

fusion

No

No

No

6

COL3A1

P05, P10, P23, P24, P28, P38

fusion

No

No

No

6

DDX3X

P09, P10, P20, P29, P32, P50

TSG

No

No

Yes

6

AHNAK2

P04, P06, P20, P24, P26, P31

No

No

No

Yes

6

PIM1

P21, P26, P35, P37, P46, P52

oncogene, fusion

No

No

No

6

ID3

P14, P15, P22, P26, P29, P51

TSG

No

No

No

6

DNM2

P01, P13, P20, P28, P38, P40

TSG

No

No

No

6

PTPN6

P06, P11, P12, P25, P38

TSG

No

No

No

5

FAT1

P03, P07, P09, P13, P36

TSG

No

No

No

5

ROBO2

P03, P06, P19, P24, P33

TSG

No

No

No

5

NFKBIA

P12, P18, P43, P50, P53

No

No

No

No

5

BCL7A

P12, P26, P34, P40, P53

fusion

No

No

No

5

SGK1

P04, P06, P18, P25, P28

oncogene

No

No

Yes

5

ZEB2

P06, P13, P31, P48

No

No

No

Yes

4

MEF2B

P08, P34, P47, P52

No

No

No

No

4

PRDM1

P36, P37, P44, P45

TSG

TSG

No

No

4

CD79B

P02, P03, P08, P46

oncogene

No

No

No

4

NFKBIE

P17, P19, P38, P48

TSG

No

No

No

4

SOCS1

P26, P28, P38, P43

TSG

TSG

No

No

4

FAT3

P05, P20, P21, P40

 

No

No

No

4

CHD4

P07, P24, P35, P40

oncogene

No

No

Yes

4

NCOR2

P02, P20, P36, P42

TSG

No

No

Yes

4

ZFP36L2

P08, P20, P26, P39

No

No

No

Yes

4

DST

P04, P05, P45, P47

No

No

No

Yes

4

KIAA1549

P20, P37, P40, P43

fusion

No

No

No

4

AHNAK

P17, P45, P47, P51

No

No

No

Yes

4

GNAQ

P06, P38, P46, P51

oncogene

Oncogene

No

No

4

TBL1XR1

P06, P18, P26, P51

oncogene, TSG, fusion

No

pancan_fre:0.80%

Yes

4

HLA-B

P13, P19, P24, P27

No

No

No

Yes

4

BRAF

P01, P04, P06, P53

oncogene, fusion

Oncogene

pancan_fre:1.50%

Yes

4

ACTB

P06, P17, P20, P35

No

No

No

Yes

4

PLEC

P06, P11, P28, P40

No

No

No

Yes

4

SYNE1

P04, P06, P33, P34

No

No

No

Yes

4

DCC

P03, P24, P36, P52

 

No

No

No

4

ROS1

P01, P20, P24, P45

oncogene, fusion

No

No

No

4

ARID1A

P04, P11, P18, P22

TSG, fusion

TSG

pancan_fre:5.40%

Yes

4

TNFRSF14

P06, P11, P14, P25

TSG

No

No

No

4

STAT3

P04, P18, P19, P48

oncogene

No

No

Yes

4

PIK3CD

P13, P16, P20

No

No

No

No

3

FAM135B

P06, P20, P38

 

No

No

No

3

TRIO

P04, P36, P40

No

No

No

Yes

3

TRIM24

P03, P20, P50

oncogene, TSG, fusion

No

No

No

3

UBR5

P04, P20, P43

TSG

No

No

No

3

FAM47C

P04, P17, P34

 

No

No

No

3

LRRK2

P09, P42, P52

No

No

pancan_fre:2.80%

Yes

3

GRIN2A

P01, P04, P20

TSG

No

No

No

3

FBN2

P01, P09, P20

No

No

No

Yes

3

NEB

P01, P36, P51

No

No

No

Yes

3

IRS2

P02, P50, P53

No

No

No

Yes

3

PRKCD

P06, P11, P24

No

No

No

Yes

3

ACTG1

P06, P14, P26

No

No

No

Yes

3

KALRN

P20, P31, P43

No

No

No

Yes

3

BIRC6

P06, P09, P20

oncogene, fusion

No

No

No

3

CLTC

P16, P20, P50

TSG, fusion

No

No

Yes

3

APC

P06, P18, P36

TSG

TSG

pancan_fre:7.30%

Yes

3

PTEN

P01, P09, P35

TSG

TSG

pancan_fre:9.70%

Yes

3

CXCR4

P01, P26, P50

oncogene

No

No

No

3

JMJD1C

P03, P08, P12

No

No

No

Yes

3

FAS

P06, P09, P18

TSG

No

No

No

3

BCL6

P05, P43, P52

oncogene, fusion

No

No

No

3

PCBP1

P09, P44, P46

 

No

pancan_fre:0.30%

Yes

3

BCL11B

P07, P11, P12

oncogene, TSG, fusion

No

No

No

3

PTPRB

P01, P36, P50

TSG

No

No

No

3

CIITA

P11, P25, P40

TSG, fusion

No

No

No

3

HGF

P09, P36, P48

No

No

pancan_fre:1.70%

Yes

3

IRF4

P08, P38, P42

oncogene, TSG, fusion

No

No

No

3

NIN

P17, P27, P36

fusion

No

No

Yes

3

RARA

P10, P33, P48

oncogene, fusion

No

No

No

3

TRRAP

P20, P36, P50

oncogene

No

No

No

3

MAP2K1

P12, P28, P50

oncogene

Oncogene

No

No

3

KMT2C

P05, P11, P15

TSG

No

No

No

3

PABPC1

P25, P26, P32

oncogene, TSG

No

No

Yes

3

PIK3CB

P32, P53

oncogene

No

No

Yes

2

CBLB

P26, P52

TSG

No

No

No

2

MDN1

P09, P53

No

No

No

Yes

2

RAB11FIP5

P07, P20

No

No

No

Yes

2

FIP1L1

P01, P15

fusion

No

No

No

2

CFH

P09, P20

No

No

No

Yes

2

KDM6B

P26, P53

No

No

No

Yes

2

MYCN

P25, P27

oncogene

No

No

No

2

CAMTA1

P37, P51

TSG, fusion

No

No

No

2

TCF7

P41, P44

No

No

No

Yes

2

PDGFRA

P20, P40

oncogene, fusion

Oncogene

pancan_fre:1.90%

Yes

2

TET1

P09, P20

oncogene, TSG, fusion

No

No

No

2

ARHGAP32

P01, P04

No

No

No

Yes

2

SFRP4

P09, P12

TSG

No

No

No

2

PRRC2A

P20, P50

No

No

No

Yes

2

NTRK2

P04, P25

No

No

No

No

2

HSP90AB1

P11, P20

fusion

No

No

Yes

2

KRAS

P25, P28

oncogene

Oncogene

pancan_fre:6.70%

Yes

2

PCM1

P06, P24

fusion

No

No

Yes

2

SMARCA4

P15, P28

TSG

TSG

No

Yes

2

CHD8

P38, P50

No

No

No

Yes

2

NCOR1

P03, P32

TSG

TSG

pancan_fre:2.20%

Yes

2

ZFP36L1

P26, P46

No

No

No

Yes

2

MKI67

P17, P45

No

No

No

Yes

2

RGPD3

P45, P48

 

No

No

No

2

FBXO11

P07, P51

TSG

No

No

Yes

2

LRIG3

P01, P20

TSG, fusion

No

No

No

2

NFATC2

P08, P43

oncogene, fusion

No

No

No

2

KIT

P10, P23

oncogene

Oncogene

pancan_fre:1.40%

Yes

2

CREBBP

P09, P20

oncogene, TSG, fusion

TSG

No

No

2

TCL1A

P07, P25

oncogene, fusion

No

No

No

2

MSH3

P12, P42

No

No

No

No

2

SF3B1

P01, P11

oncogene

Oncogene

pancan_fre:1.30%

Yes

2

PRKCB

P04, P13

 

No

No

No

2

ZNF91

P24, P40

No

No

No

Yes

2

BCLAF1

P09, P53

 

No

No

Yes

2

MAP3K4

P11, P13

No

No

No

Yes

2

FGFR4

P45, P50

oncogene

No

No

No

2

FGFR2

P45, P52

oncogene, fusion

Oncogene

pancan_fre:1.50%

Yes

2

PRPF8

P01, P09

No

No

No

Yes

2

SPEN

P11, P38

TSG

No

No

Yes

2

SPEG

P45, P53

No

No

No

Yes

2

PDE4DIP

P03, P38

fusion

No

No

No

2

AFF3

P01, P17

oncogene, fusion

No

No

No

2

SALL4

P40, P50

oncogene

No

No

No

2

ANKRD11

P04, P35

No

No

No

Yes

2

TFDP1

P26, P42

No

No

No

Yes

2

INPP4B

P36, P50

No

No

No

No

2

MICAL1

P09, P40

No

No

No

Yes

2

SIN3A

P15, P34

No

No

pancan_fre:1.10%

Yes

2

HLA-A

P12, P18

fusion

No

No

Yes

2

TFEB

P04, P28

oncogene, fusion

No

No

No

2

KIAA1109

P20, P40

No

No

No

Yes

2

TNFAIP3

P11, P36

TSG

TSG

No

No

2

TP63

P09, P11

oncogene, TSG

No

No

No

2

PTPRD

P40, P45

TSG

No

No

No

2

CLTCL1

P20, P48

TSG, fusion

No

No

Yes

2

ZMYM3

P09, P20

TSG

No

No

No

2

MGA

P01, P41

No

No

No

Yes

2

NSD1

P48, P51

fusion

No

pancan_fre:2.40%

Yes

2

CSF1R

P20, P42

oncogene

Oncogene

No

No

2

MEGF6

P11, P45

No

No

No

Yes

2

HIST1H3B

P01, P26

oncogene

Oncogene

No

No

2

ADCY1

P03, P20

No

No

No

Yes

2

RET

P17, P27

oncogene, fusion

Oncogene

No

No

2

EPHA7

P26, P36

 

No

No

No

2

EPHA3

P20, P51

 

No

pancan_fre:2.10%

Yes

2

RBM15

P04, P09

fusion

No

No

No

2

ZNF521

P08, P09

oncogene, fusion

No

No

No

2

CNTNAP2

P09, P35

TSG

No

No

No

2

RASA1

P28, P51

No

No

No

Yes

2

PTPRC

P26, P31

TSG

No

No

No

2

CAD

P20, P37

No

No

No

Yes

2

EPS15

P32, P50

TSG, fusion

No

No

No

2

EXT2

P05, P20

TSG

No

No

No

2

RAG1

P24, P38

No

No

No

Yes

2

CDH10

P03, P12

TSG

No

No

No

2

ZFHX3

P01, P20

TSG

No

No

Yes

2

MTOR

P07, P51

oncogene

No

pancan_fre:3.00%

Yes

2

EP300

P06, P09

TSG, fusion

TSG

pancan_fre:2.50%

Yes

2

CNBD1

P06, P12

 

No

No

No

2

ABCB1

P24, P42

No

No

No

Yes

2

CTNNA2

P09, P25

oncogene

No

No

No

2

NOTCH1

P33, P37

oncogene, TSG, fusion

TSG

pancan_fre:3.10%

Yes

2

IKBKB

P09, P27

oncogene

No

No

No

2

MYO5A

P01, P38

fusion

No

No

No

2

STRN

P20, P50

fusion

No

No

No

2

NRG1

P20, P53

TSG, fusion

No

No

No

2

MALT1

P28, P48

oncogene, fusion

No

No

No

2

PHF6

P08, P20

TSG

TSG

pancan_fre:0.80%

Yes

2

NAV3

P04, P45

No

No

pancan_fre:4.60%

Yes

2

MYCBP2

P04, P43

No

No

No

Yes

2

NBEA

P48, P53

 

No

No

Yes

2

HSP90AA1

P04, P26

fusion

No

No

No

2

CHD7

P31, P37

No

No

No

Yes

2

PIK3CG

P52

No

No

pancan_fre:1.70%

Yes

1

HIST1H4I

P14

fusion

No

No

No

1

HSPA8

P04

No

No

No

Yes

1

NUP98

P20

oncogene, fusion

No

No

Yes

1

XPA

P46

TSG

No

No

No

1

CEP89

P04

fusion

No

No

No

1

XPO1

P28

oncogene

No

No

No

1

CSDE1

P51

No

No

No

Yes

1

TTK

P09

No

No

No

Yes

1

COL1A1

P26

fusion

No

No

No

1

ZEB1

P52

oncogene

No

No

No

1

ITGAV

P13

 

No

No

No

1

ZNF703

P14

No

No

No

Yes

1

ERBB2IP

P14

No

No

No

Yes

1

ARHGEF12

P20

TSG, fusion

No

No

No

1

MUC1

P29

fusion

No

No

No

1

EWSR1

P20

oncogene, fusion

No

No

Yes

1

AHCTF1

P26

No

No

No

Yes

1

RPL22

P09

TSG, fusion

No

pancan_fre:1.00%

Yes

1

SIX2

P22

oncogene

No

No

No

1

PRX

P20

No

No

pancan_fre:0.90%

Yes

1

ARID2

P06

TSG

TSG

No

Yes

1

SET

P20

oncogene, fusion

No

No

No

1

ELK4

P36

oncogene, fusion

No

No

No

1

TRIM7

P46

No

No

No

Yes

1

FBXW7

P05

TSG

TSG

pancan_fre:3.00%

Yes

1

TGFBR2

P11

TSG

No

pancan_fre:1.10%

Yes

1

SH3PXD2A

P20

No

No

No

Yes

1

SVIL

P20

No

No

No

Yes

1

PHLDA1

P21

No

No

No

Yes

1

NBPF10

P28

No

No

No

Yes

1

PBX1

P50

oncogene, fusion

No

No

No

1

ARHGAP35

P20

No

No

pancan_fre:2.50%

Yes

1

PTCH1

P33

TSG

TSG

No

No

1

CUL1

P23

No

No

No

Yes

1

CDX2

P20

TSG, fusion

No

No

No

1

PTPN13

P12

TSG

No

No

Yes

1

IRS4

P09

oncogene, TSG

No

No

No

1

DMD

P06

No

No

No

Yes

1

PPM1D

P09

oncogene

No

No

No

1

SRSF2

P14

oncogene

Oncogene

No

No

1

RALGAPA1

P17

No

No

No

Yes

1

EIF1AX

P04

 

No

No

No

1

MED12

P11

TSG

Oncogene

No

Yes

1

NTRK3

P45

oncogene, fusion

No

No

No

1

MED13

P20

No

No

No

Yes

1

ARHGAP26

P21

TSG, fusion

No

No

No

1

SRGAP3

P01

fusion

No

No

No

1

ACSL6

P01

fusion

No

No

No

1

FLI1

P01

oncogene, fusion

No

No

No

1

CHD2

P28

TSG

No

No

No

1

POLG

P20

TSG

No

No

No

1

DDX5

P23

oncogene, fusion

No

No

Yes

1

MN1

P52

oncogene, fusion

No

No

Yes

1

PRDM16

P24

oncogene, fusion

No

No

No

1

POT1

P53

TSG

No

No

No

1

ARHGAP5

P20

oncogene

No

No

No

1

SOS1

P51

No

No

No

Yes

1

KIF20B

P20

No

No

No

Yes

1

TSHZ2

P47

No

No

pancan_fre:1.80%

No

1

EIF3E

P45

TSG, fusion

No

No

No

1

BCL2L12

P39

oncogene

No

No

No

1

KAT6A

P41

oncogene, fusion

No

No

No

1

CDH11

P27

TSG, fusion

No

No

No

1

BAP1

P53

TSG

TSG

pancan_fre:2.00%

Yes

1

UBE4A

P20

No

No

No

Yes

1

JAK2

P09

oncogene, fusion

Oncogene

No

Yes

1

N4BP2

P26

TSG

No

No

No

1

GRM3

P13

oncogene

No

No

No

1

ZNF384

P06

fusion

No

No

No

1

AKAP9

P01

fusion

No

No

Yes

1

EEF1A1

P08

No

No

No

Yes

1

PBRM1

P20

TSG

TSG

pancan_fre:5.40%

Yes

1

ERC1

P48

fusion

No

No

No

1

ERG

P36

oncogene, fusion

No

No

No

1

MYOD1

P36

oncogene

No

No

No

1

CDK12

P25

TSG

No

pancan_fre:1.50%

Yes

1

A1CF

P45

oncogene

No

No

No

1

WT1

P23

oncogene, TSG, fusion

TSG

pancan_fre:1.00%

Yes

1

BARD1

P31

TSG

No

No

Yes

1

BAZ1A

P31

TSG

No

No

No

1

FN1

P01

No

No

No

Yes

1

FUBP1

P51

oncogene

TSG

No

No

1

PRRX1

P51

fusion

No

No

No

1

ATR

P25

TSG

No

pancan_fre:2.40%

Yes

1

BRIP1

P53

TSG

No

No

No

1

FLT1

P01

No

No

No

No

1

FANCF

P40

TSG

No

No

No

1

PTK6

P12

oncogene, TSG

No

No

No

1

MSH6

P20

TSG

TSG

No

No

1

SPECC1

P45

fusion

No

No

No

1

PRKCI

P01

No

No

No

No

1

MATK

P48

No

No

No

Yes

1

ACKR3

P50

oncogene, fusion

No

No

No

1

ERBB3

P32

oncogene

No

No

No

1

IDH2

P42

oncogene

Oncogene

pancan_fre:0.80%

Yes

1

FGFR3

P13

oncogene, fusion

Oncogene

pancan_fre:1.00%

Yes

1

FGFR1

P51

oncogene, fusion

No

No

No

1

AFF4

P31

oncogene, fusion

No

No

No

1

MAP1 B

P08

No

No

No

Yes

1

EPB41L3

P04

No

No

No

Yes

1

TPR

P43

fusion

No

No

Yes

1

GNAS

P19

oncogene

Oncogene

No

Yes

1

RBMX

P53

No

No

No

Yes

1

AFF1

P06

fusion

No

No

No

1

CDKN2C

P26

TSG

No

pancan_fre:0.20%

Yes

1

WHSC1L1

P04

oncogene, fusion

No

No

Yes

1

GOT2

P47

No

No

No

Yes

1

LYN

P11

No

No

No

Yes

1

MGMT

P06

TSG

No

No

No

1

PMS1

P20

 

No

No

No

1

PMS2

P20

TSG

No

No

No

1

LHFP

P14

fusion

No

No

No

1

AMER1

P52

TSG

No

No

No

1

NACA

P09

fusion

No

No

No

1

FGF4

P13

No

No

No

No

1

FGF3

P35

No

No

No

No

1

HOXD11

P40

oncogene, fusion

No

No

No

1

SMCHD1

P03

No

No

No

Yes

1

JAZF1

P19

fusion

No

No

No

1

BCOR

P40

TSG, fusion

TSG

No

Yes

1

ADAM10

P03

No

No

No

Yes

1

G3BP1

P09

No

No

No

Yes

1

BCL10

P05

TSG, fusion

No

No

No

1

CDKN1B

P40

TSG

No

pancan_fre:0.70%

Yes

1

SETBP1

P12

oncogene, fusion

Oncogene

pancan_fre:2.20%

No

1

AKT1

P14

oncogene

Oncogene

pancan_fre:0.90%

Yes

1

PSIP1

P50

oncogene, fusion

No

No

No

1

CCDC6

P36

TSG, fusion

No

No

No

1

ARHGEF10

P25

TSG

No

No

No

1

REL

P19

oncogene

No

No

No

1

COL2A1

P17

fusion

No

No

No

1

TSC1

P12

TSG

TSG

No

No

1

SMC3

P26

No

No

pancan_fre:1.20%

Yes

1

ARID5B

P37

No

No

pancan_fre:1.60%

Yes

1

IGF1R

P15

No

No

No

No

1

HNF1A

P20

TSG

TSG

No

No

1

E2F3

P26

No

No

No

No

1

ARHGEF6

P51

No

No

No

Yes

1

CDH1

P48

TSG

TSG

pancan_fre:2.50%

Yes

1

KIFC3

P01

No

No

No

Yes

1

ARHGEF10L

P21

TSG

No

No

No

1

NEK8

P17

No

No

No

Yes

1

FAM129B

P20

No

No

No

Yes

1

IL7R

P36

oncogene

No

No

No

1

MYH9

P10

TSG, fusion

No

No

Yes

1

CYLD

P20

TSG

TSG

No

Yes

1

CASC5

P09

TSG, fusion

No

No

No

1

NUTM1

P48

oncogene, fusion

No

No

No

1

SOX17

P11

No

No

pancan_fre:0.30%

Yes

1

BRCA1

P11

TSG

TSG

pancan_fre:1.90%

Yes

1

BRCA2

P20

TSG

TSG

pancan_fre:2.70%

Yes

1

WNK2

P53

TSG

No

No

No

1

P4HB

P26

No

No

No

Yes

1

ARNT

P53

oncogene, TSG, fusion

No

No

No

1

BCL3

P07

oncogene, fusion

No

No

No

1

RNF213

P20

fusion

No

No

Yes

1

DOCK2

P32

No

No

No

Yes

1

09-Sep

P31

fusion

No

No

No

1

05-Sep

P12

fusion

No

No

No

1

DCAF12L2

P23

 

No

No

No

1

NEDD4L

P20

No

No

No

Yes

1

RAP1GDS1

P38

oncogene, fusion

No

No

No

1

RPP38

P20

No

No

No

Yes

1

CTNND2

P43

oncogene

No

No

No

1

ATRX

P19

TSG

TSG

pancan_fre:2.80%

Yes

1

RAD51B

P44

TSG, fusion

No

No

No

1

TP53BP1

P20

No

No

No

Yes

1

PICALM

P20

fusion

No

No

No

1

BCL2

P26

oncogene, fusion

Oncogene

No

No

1

ASXL2

P40

TSG

No

No

No

1

SMC1A

P35

TSG

No

pancan_fre:1.50%

Yes

1

TLR4

P43

No

No

pancan_fre:1.90%

Yes

1

KDM6A

P50

oncogene, TSG

TSG

pancan_fre:2.00%

Yes

1

MET

P06

oncogene

Oncogene

No

No

1

DNM3

P36

No

No

No

Yes

1

BCL11A

P20

oncogene, fusion

No

No

No

1

GATA3

P20

oncogene, TSG

TSG

pancan_fre:3.20%

Yes

1

RPN1

P45

fusion

No

No

No

1

EPPK1

P11

No

No

pancan_fre:1.40%

Yes

1

AXL

P20

No

No

No

No

1

CBL

P26

oncogene, TSG, fusion

Oncogene

No

No

1

PRDM2

P46

TSG

No

No

Yes

1

GIGYF2

P03

No

No

No

Yes

1

NR4A2

P12

No

No

No

Yes

1

MITF

P38

oncogene

No

No

No

1

RPTOR

P08

No

No

No

No

1

CNOT3

P46

TSG

No

No

Yes

1

BRD3

P20

oncogene, fusion

No

No

No

1

SPTAN1

P43

No

No

No

Yes

1

PPFIBP1

P20

fusion

No

No

No

1

MKL1

P50

oncogene, TSG, fusion

No

No

No

1

FANCD2

P50

TSG

No

No

No

1

ZBTB16

P06

TSG, fusion

No

No

No

1

DOCK4

P47

No

No

No

Yes

1

SND1

P50

oncogene, fusion

No

No

No

1

ERCC3

P45

TSG

No

No

No

1

USP6

P07

oncogene, fusion

No

No

No

1

HIP1

P52

oncogene, fusion

No

No

No

1

INTS1

P32

No

No

No

Yes

1

TGOLN2

P38

No

No

No

Yes

1

IDH1

P14

oncogene

Oncogene

pancan_fre:1.50%

Yes

1

PTPRK

P39

TSG, fusion

No

No

No

1

GMPS

P40

fusion

No

No

No

1

ATIC

P03

fusion

No

No

No

1

FOXA2

P20

No

No

pancan_fre:0.50%

Yes

1

CDKN2A

P22

TSG

TSG

pancan_fre:3.60%

Yes

1

SKI

P45

oncogene

No

No

No

1

CCR7

P11

oncogene

No

No

No

1

FOSL2

P06

No

No

No

Yes

1

PWWP2A

P51

fusion

No

No

No

1

DDR2

P09

oncogene

No

No

No

1

CD274

P07

TSG, fusion

No

No

No

1

CDH17

P32

oncogene

No

No

No

1

FANCA

P26

TSG

No

No

Yes

1

ARID1B

P38

TSG

TSG

No

No

1

NIPBL

P09

No

No

No

Yes

1

KMT2A

P19

oncogene, fusion

No

No

No

1

ANKRD6

P01

No

No

No

Yes

1

CTNND1

P03

 

No

No

Yes

1

MACF1

P11

No

No

No

Yes

1

PABPC4

P27

No

No

No

Yes

1

PREX2

P26

oncogene

No

No

No

1

ZNRF3

P04

TSG

No

No

No

1

ETV1

P20

oncogene, fusion

No

No

No

1

ETV5

P09

oncogene, fusion

No

No

No

1

TAF1

P06

No

No

pancan_fre:2.30%

Yes

1

HOXA11

P14

oncogene, TSG, fusion

No

No

No

1

ABL2

P01

oncogene, fusion

No

No

No

1

POLD1

P20

TSG

No

No

No

1

HMGA2

P13

oncogene, fusion

No

No

No

1

MSN

P04

fusion

No

No

Yes

1

ZRSR2

P22

TSG

No

No

No

1