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Table 1 Summary of characteristics of CD20 splice variant transcripts

From: New CD20 alternative splice variants: molecular identification and differential expression within hematological B cell malignancies

Transcripts Donor site (DS) Acceptor site (AS) Reading frame CDS (length) (bp) Putative proteine Junction sequence
nta Cryptic (Cr) or canonical (Ca) Location Seq nta Cryptic (Cr) or canonical (Ca) Location Seq AA (length) Size (kDa) nt AA
D393-CD20 112 Cr Ex3 GT 612 Cr Ex7 AG Yes 393 131 17–23 (15) TTCACTG/GAACTTG RMSSL/ELVIA
D657-CD20 337 Ca Int5 GC 573 Ca Int6 AG Yes 657 219 25 GTGTTTG/GGCATTT SRKCL/GILSV
D618-CD20 337 Ca Int5 GC 612 Cr Ex7 AG Yes 618 206 23 GTGTTTG/GAACTTG SRKCL/ELVIA
D480-CD20 160 Ca Int3 GT 573 Ca Int6 AG Yes 480 160 18 TTTGGGG/GGCATTT SKTLG/GILSV
D177-CD20 142 Cr Ex3 GA 858 Cr Ex8 AG Yes 177 59 6,5 CATGAGG/GAATCCT SFFMR/ESSPI
  1. aFrom ATG site: ref Genebank NM 152866.2