From: Nucleotide excision repair deficiency in melanoma in response to UVA
Gene | Cell Type | Time (h) | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
0 | 1 | 4 | 24 | 48 | |||||||
RE | P value | RE | P value | RE | P value | RE | P value | RE | P value | ||
Transcription coupled repair (TCR) | |||||||||||
 ERCC6 | Melanocytes | 0.0883 | NS | 0.0000 | <0.001 | 0.1079 | NS | 0.0236 | <0.001 | 0.3084 | NS |
Melanoma | 0.1345 | 0.1003 | 0.1534 | 0.1715 | 0.2396 | ||||||
 ERCC8 | Melanocytes | 0.0893 | NS | 0.0000 | <0.001 | 0.1026 | NS | 0.0251 | <0.001 | 0.1102 | NS |
Melanoma | 0.1707 | 0.0586 | 0.0780 | 0.0482 | 0.0980 | ||||||
Nucleotide excision repair (NER) | |||||||||||
 XPA | Melanocytes | 0.1288 | 0.03 | 0.2592 | <0.001 | 0.5513 | <0.001 | 0.1530 | NS | 0.5681 | NS |
Melanoma | 0.0924 | 0.1161 | 0.1447 | 0.2406 | 0.3585 | ||||||
 RPA1 | Melanocytes | 0.4713 | 0.02 | 0.3281 | <0.001 | 1.1675 | NS | 0.9926 | 0.038 | 4.1019 | NS |
Melanoma | 2.0848 | 1.3489 | 0.9849 | 2.4304 | 2.1699 | ||||||
 RPA2 | Melanocytes | 0.2883 | 0.002 | 0.4576 | 0.002 | 1.3346 | NS | 0.4085 | <0.001 | 1.5100 | NS |
Melanoma | 1.7746 | 1.2359 | 1.2400 | 1.9103 | 1.6426 | ||||||
 ERCC1 | Melanocytes | 1.1466 | NS | 1.2102 | NS | 4.1937 | <0.001 | 6.4460 | <0.001 | 3.0374 | 0.04 |
Melanoma | 1.1916 | 1.4276 | 1.5437 | 1.5859 | 2.2263 | ||||||
 ERCC2 | Melanocytes | 0.6308 | NS | 0.9042 | 0.007 | 1.7292 | <0.001 | 0.8925 | <0.001 | 1.1017 | 0.03 |
Melanoma | 0.5406 | 0.4764 | 0.3694 | 0.4094 | 0.5468 | ||||||
 ERCC3 | Melanocytes | 0.1390 | <0.001 | 0.7994 | NS | 0.8556 | <0.001 | 0.2262 | <0.001 | 1.0353 | 0.05 |
Melanoma | 0.4889 | 0.4753 | 0.3632 | 0.6632 | 0.6733 | ||||||
 ERCC4 | Melanocytes | 0.1018 | NS | 0.0000 | <0.001 | 0.1832 | 0.009 | 0.0000 | <0.001 | 0.4600 | NS |
Melanoma | 0.1977 | 0.1656 | 0.1709 | 0.2446 | 0.3675 | ||||||
 ERCC5 | Melanocytes | 0.0537 | 0.001 | 0.0000 | <0.001 | 0.1138 | NS | 0.0000 | <0.001 | 0.4116 | NS |
Melanoma | 0.2245 | 0.2294 | 0.1160 | 0.2777 | 0.3699 |